CDS

Accession Number TCMCG051C51146
gbkey CDS
Protein Id XP_024448940.1
Location join(23123..25071,25680..26199)
Gene LOC112325978
GeneID 112325978
Organism Populus trichocarpa

Protein

Length 822aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024593172.1
Definition protein SCARECROW-like [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description Belongs to the GRAS family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0001708        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008356        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009956        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032507        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045165        [VIEW IN EMBL-EBI]
GO:0045185        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051235        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0051457        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051651        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0072595        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090610        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTGAGGAAGAGGATGGCTTCTGAGATGATGGAAGTGCAATCAGCGATTACTCCCCAAAATCATCAGAGGTTATCTCGAGGTAACATCATCAGTAGCACCAACGTCTATTCACTTTCAATATCAGACAACAACAACAACGATGATGATGATGATGTTATTGGTATGACTAGAAGTACTGGTGCCTCTTCTTTTACAAGTTGTTCCAACAACAATAATATTAACCCTAATAACCCCAACTCAATCTTATATCCAGTCCTCAACTACTCTACTATGACTTCTATGCTACCTTCTTCCACGAACTTGACAGCAATTACGTCAGGCGTGTCTGCTTCTCTGTCTGTTTCTGAGTTCTTGTCTCCTACAGTACTTTCCACCAACTTAATTACTAGCTGCAACGACACCCACACCCAATCCCAACTCCCAGCCGTCTGTGGTTTCTCTGGTCTACCCTTGTTCCCTCCAGCTGAAATAAAAAGAAACAATATCCGATCAAACGCTGCCGCCGATCCACCGCCCGGCCTCATCACTACCTCTATTACTGCTCCTACTACTAGTACTCTTGCTTCAGCTTCCATGGAAGATGCCACATCCGCCACTGCTTGGATTGATGGCCTCATAAAGGACCTACTCCACACTTCCACCAACGTGTCCATTCCTCAGCTCATTCAGAACGTGAGGGAGATCATCTACCCTTGCAACCCCAATCTGGCCTCCCTCCTCGAGTACAGGCTCCGGTCTTTGACAGACCCAATAATCCCGCCCAATATTCTCCCGGTGGAGAGGAGTAGGAATAAGGAGGCAGCCGCAACAGTACCATTACCGCTTCAGACCCAGAGGCGTTGCAATCAAGGTCATGCCTCTAATTCTGGGCTCACTCTTGATCTTGACAATATCGTCTCTAATTCAGCTCCTCCAGTTTCTTCACATGTTAGTCACTACTCTAACTGGGGACCGACGCCACCTCTCATCATCTGCCAACCAAACATCCAACAGCAACACCAGCAGCCACAAATCCACCTTGTTCATCATGATCAGCATCTGCAACAACAGCAGCAGAAGCAACAAGAGAGCCCTTCTTCTACTTCCAATGTTACACCAACTATTCTAGCATTAAATCAAGGACAACCTCCACAACAGCAAGCACAAGATCAGCAGCAGGAAAAATCATCTTCTGCGGAGACAGAACAGGTAAGCAGCAGCACATCCCCTCCCTCTTCATCAGCAGCAGCCAGCCGAGATAAGAAAGAAGAGATGCGGCAGCAAAAGAGAGACGAAGAAGGCTTGCACCTTCTGACCTTACTGCTCCAATGCGCGGAGGCCGTCTCCGCTGATAATTTTGAGGAAGCTAATAAGATGCTACTTGAGATCTCGGAGCTGTCGACGCCATTTGGAACTTCAGCGCAGCGAGTGGCTGCTTACTTCTCGGAGGCTATGTCAGCAAGGCTGGTCAGCTCTTGCTTGGGGATATACGCCACGCTTCCTTCAATGCCCCAAAGCCATACCCAGAAGATGGCTTCGGCCTTTCAGGTGTTCAATGGGATTGGCCCTTTCGTCAAGTTCTCTCATTTCACAGCCAACCAAGCGATACAAGAAGCGTTTGAAAGGGAAGAGAGAGTCCACATCATAGATCTGGACGTCATGCAAGGTTTGCAGTGGCCTGGGCTATTTCATATCCTAGCATCTAGGCCAGGTGGACCACCATATGTCCGCTTGACCGGGCTGGGGACCTCTTTGGAGGCTCTTGAAGCAACGGGGAAACGTCTGTCTGATTTCGCACACAAACTGGGACTTCCCTTTGAGTTCATTCCAGTGGCCGAAAAGGTTGGAAATTTGGAGCCGGAGAGGCTTAATGTGAGCAAGAGGGAGGCTGTGGCCGTCCACTGGTTGCAACACTCGCTCTACGATGTCACCGGTTCCGATACAAATATGCTTTGTCTGTTGCAAAGGTTGGCACCAAAAGTAGTGACTGTGGTAGAACAGGACCTAAGCCATGCGGGATCCTTCCTGGGAAGGTTTGTGGAGGCCATACACTACTACTCCGCACTGTTCGACTCCTTGGGAGCAAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTAGTGGAGCAGCAGTTGCTCTCCAGAGAGATACGCAATGTATTGGCCGTGGGAGGTCCTTCCAGAAGTGGGGATGTCAAGTTCCACAACTGGAGGGAAAAACTACAACAGTCCGGGTTCAAAGGCATCTCTCTTGCTGGGAATGCTGCTACACAAGCCACTTTGCTCCTTGGCATGTTCCCCTCTGATGGTTATACATTAGTGGAGGATAATGGCACCCTCAAGCTTGGTTGGAAAGACCTTTGCTTGCTCACTGCTTCTGCCTGGAGGCCTTTTCACGTTACTATTGAAACTGCTACTACCACCCCTCGCCACCACCACCACCACCAACAACAACAACAACACCACCACCACCGCTTTGTCACTGCCTAG
Protein:  
MLRKRMASEMMEVQSAITPQNHQRLSRGNIISSTNVYSLSISDNNNNDDDDDVIGMTRSTGASSFTSCSNNNNINPNNPNSILYPVLNYSTMTSMLPSSTNLTAITSGVSASLSVSEFLSPTVLSTNLITSCNDTHTQSQLPAVCGFSGLPLFPPAEIKRNNIRSNAAADPPPGLITTSITAPTTSTLASASMEDATSATAWIDGLIKDLLHTSTNVSIPQLIQNVREIIYPCNPNLASLLEYRLRSLTDPIIPPNILPVERSRNKEAAATVPLPLQTQRRCNQGHASNSGLTLDLDNIVSNSAPPVSSHVSHYSNWGPTPPLIICQPNIQQQHQQPQIHLVHHDQHLQQQQQKQQESPSSTSNVTPTILALNQGQPPQQQAQDQQQEKSSSAETEQVSSSTSPPSSSAAASRDKKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNFEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPSMPQSHTQKMASAFQVFNGIGPFVKFSHFTANQAIQEAFEREERVHIIDLDVMQGLQWPGLFHILASRPGGPPYVRLTGLGTSLEALEATGKRLSDFAHKLGLPFEFIPVAEKVGNLEPERLNVSKREAVAVHWLQHSLYDVTGSDTNMLCLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWRPFHVTIETATTTPRHHHHHQQQQQHHHHRFVTA